Genomics of Gene Expression

163 entries « 8 of 9 »
23.

Hoogerwerf, W. A.; Sinha, M.; Conesa, A.; Luxon, B. A.; Shahinian, V. B.; Cornelissen, G.; Halberg, F.; Bostwick, J.; Timm, J.; Cassone, V. M.

Transcriptional Profiling of mRNA Expression in the Mouse Distal Colon Journal Article

In: GASTROENTEROLOGY, vol. 135, no. 6, pp. 2019-2029, 2008, ISSN: 0016-5085.

Abstract | Links | BibTeX

22.

Stierum, R.; Conesa, A.; Heijne, W.; van Ommen, B.; Junker, K.; Scott, M. P.; Price, R. J.; Meredith, C.; Lake, B. G.; Groten, J.

Transcriptome analysis provides new insights into liver changes induced in the rat upon dietary administration of the food additives butylated hydroxytoluene, curcumin, propyl gallate and thiabendazole Journal Article

In: FOOD AND CHEMICAL TOXICOLOGY, vol. 46, no. 8, pp. 2616-2628, 2008, ISSN: 0278-6915.

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21.

Tarraga, J.; Medina, I.; Carbonell, J.; Huerta-Cepas, J.; Minguez, P.; Alloza, E.; Al-Shahrour, F.; Vegas-Azcarate, S.; Goetz, S.; Escobar, P.; Garcia-Garcia, F.; Conesa, A.; Montaner, D.; Dopazo, J.

GEPAS, a web-based tool for microarray data analysis and interpretation Journal Article

In: NUCLEIC ACIDS RESEARCH, vol. 36, no. S, pp. W308-W314, 2008, ISSN: 0305-1048.

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20.

Al-Shahrour, F.; Carbonell, J.; Minguez, P.; Goetz, S.; Conesa, A.; Tarrraga, J.; Medina, I.; Alloza, E.; Montaner, D.; Dopazo, J.

Babelomics: advanced functional profiling of transcriptomics, proteomics and genomics experiments Journal Article

In: NUCLEIC ACIDS RESEARCH, vol. 36, no. S, pp. W341-W346, 2008, ISSN: 0305-1048.

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19.

Botton, A.; Galla, G.; Conesa, A.; Bachem, C.; Ramina, A.; Barcaccia, G.

Large-scale Gene Ontology analysis of plant transcriptome-derived sequences retrieved by AFLP technology Journal Article

In: BMC GENOMICS, vol. 9, 2008, ISSN: 1471-2164.

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18.

Gotz, S.; Garcia-Gomez, J. M.; Terol, J.; Williams, T. D.; Nagaraj, S. H.; Nueda, M. J.; Robles, M.; Talon, M.; Dopazo, J.; Conesa, A.

High-throughput functional annotation and data mining with the Blast2GO suite Journal Article

In: NUCLEIC ACIDS RESEARCH, vol. 36, no. 10, pp. 3420-3435, 2008, ISSN: 0305-1048.

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17.

Agudo, M.; Perez-Marin, M. C.; Loenngren, U.; Sobrado, P.; Conesa, A.; Canovas, I.; Salinas-Navarro, M.; Miralles-Imperial, J.; Hallbook, F.; Vidal-Sanz, M.

Time course profiling of the retinal transcriptome after optic nerve transection and optic nerve crush Journal Article

In: MOLECULAR VISION, vol. 14, no. 126, pp. 1050-1063, 2008, ISSN: 1090-0535.

Abstract | BibTeX

16.

Levin, A. M.; de Vries, R. P.; Conesa, A.; de Bekker, C.; Talon, M.; Menke, H. H.; van Peij, N. N. M. E.; Wosten, H. A. B.

Spatial differentiation in the vegetative mycelium of Aspergillus niger Journal Article

In: EUKARYOTIC CELL, vol. 6, no. 12, pp. 2311-2322, 2007, ISSN: 1535-9778.

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15.

Gandia, M.; Conesa, A.; Ancillo, G.; Gadea, J.; Forment, J.; Pallas, V.; Flores, R.; Duran-Vila, N.; Moreno, P.; Guerri, J.

Transcriptional response of Citrus aurantifolia to infection by Citrus tristeza virus Journal Article

In: VIROLOGY, vol. 367, no. 2, pp. 298-306, 2007, ISSN: 0042-6822.

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14.

Nueda, M. J.; Conesa, A.; Westerhuis, J. A.; Hoefsloot, H. C. J.; Smilde, A. K.; Talon, M.; Ferrer, A.

Discovering gene expression patterns in time course microarray experiments by ANOVA-SCA Journal Article

In: BIOINFORMATICS, vol. 23, no. 14, pp. 1792-1800, 2007, ISSN: 1367-4803.

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13.

Terol, J.; Conesa, A.; Colmenero, J. M.; Cercos, M.; Tadeo, F.; Agusti, J.; Alos, E.; Andres, F.; Soler, G.; Brumos, J.; Iglesias, D. J.; Gotz, S.; Legaz, F.; Argout, X.; Courtois, B.; Ollitrault, P.; Dossat, C.; Wincker, P.; Morillon, R.; Talon, M.

Analysis of 13000 unique Citrus clusters associated with fruit quality, production and salinity tolerance Journal Article

In: BMC GENOMICS, vol. 8, 2007, ISSN: 1471-2164.

Abstract | Links | BibTeX

12.

Williams, T. D.; Diab, A. M.; George, S. G.; Godfrey, R. E.; Sabine, V.; Conesa, A.; Minchin, S. D.; Watts, P. C.; Chipman, J. K.

Development of the GENIPOL European flounder (Platichthys flesus) microarray and determination of temporal transcriptional responses to cadmium at low dose. Journal Article

In: ENVIRONMENTAL SCIENCE & TECHNOLOGY, vol. 40, no. 20, pp. 6479-6488, 2006, ISSN: 0013-936X.

Abstract | Links | BibTeX

11.

Conesa, A.; Nueda, M.; Ferrer, A.; Talon, M.

maSigPro: a method to identify significantly differential expression profiles in time-course microarray experiments Journal Article

In: BIOINFORMATICS, vol. 22, no. 9, pp. 1096-1102, 2006, ISSN: 1367-4803.

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10.

Conesa, A.; Gotz, S.; Garcia-Gomez, J.; Terol, J.; Talon, M.; Robles, M.

Blast2GO: a universal tool for annotation, visualization and analysis in functional genomics research Journal Article

In: BIOINFORMATICS, vol. 21, no. 18, pp. 3674-3676, 2005, ISSN: 1367-4803.

Abstract | Links | BibTeX

9.

Forment, J.; Gadea, J.; Huerta, L.; Abizanda, L.; Agusti, J.; Alamar, S.; Alos, E.; Andres, F.; Arribas, R.; Beltran, J.; Berbel, A.; Blazquez, M.; Brumos, J.; Canas, L.; Cercos, M.; Colmenero-Flores, J.; Conesa, A.; Estables, B.; Gandia, M.; Garcia-Martinez, J.; Gimeno, J.; Gisbert, A.; Gomez, G.; Gonzalez-Candelas, L.; Granell, A.; Guerri, J.; Lafuente, M.; Madueno, F.; Marcos, J.; Marques, M.; Martinez, F.; Martinez-Godoy, M.; Miralles, S.; Moreno, P.; Navarro, L.; Pallas, V.; Perez-Amador, M.; Perez-Valle, J.; Pons, C.; Rodrigo, I.; Rodriguez, P.; Royo, C.; Serrano, R.; Soler, G.; Tadeo, F.; Talon, M.; Terol, J.; Trenor, M.; Vaello, L.; Vicente, O.; Vidal, C.; Zacarias, L.; Conejero, V.

Development of a citrus genome-wide EST collection and cDNA microarray as resources for genomic studies Journal Article

In: PLANT MOLECULAR BIOLOGY, vol. 57, no. 3, pp. 375-391, 2005, ISSN: 0167-4412.

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8.

Yi, X.; Conesa, A.; Punt, P.; Hager, L.

Examining the role of glutamic acid 183 in chloroperoxidase catalysis Journal Article

In: JOURNAL OF BIOLOGICAL CHEMISTRY, vol. 278, no. 16, pp. 13855-13859, 2003, ISSN: 0021-9258.

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7.

Punt, P.; van Biezen, N.; Conesa, A.; Albers, A.; Mangnus, J.; van den Hondel, C.

Filamentous fungi as cell factories for heterologous protein production Journal Article

In: TRENDS IN BIOTECHNOLOGY, vol. 20, no. 5, pp. 200-206, 2002, ISSN: 0167-7799.

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6.

Conesa, A.; Punt, P.; van den Hondel, C.

Fungal peroxidases: molecular aspects and applications Journal Article

In: JOURNAL OF BIOTECHNOLOGY, vol. 93, no. 2, pp. 143-158, 2002, ISSN: 0168-1656.

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5.

Conesa, A.; Jeenes, D.; Archer, D.; van den Hondel, C.; Punt, P.

Calnexin overexpression increases manganese peroxidase production in Aspergillus niger Journal Article

In: APPLIED AND ENVIRONMENTAL MICROBIOLOGY, vol. 68, no. 2, pp. 846-851, 2002, ISSN: 0099-2240.

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4.

Conesa, A.; Punt, P.; van Luijk, N.; van den Hondel, C.

The secretion pathway in filamentous fungi: A biotechnological view Journal Article

In: FUNGAL GENETICS AND BIOLOGY, vol. 33, no. 3, pp. 155-171, 2001, ISSN: 1087-1845.

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163 entries « 8 of 9 »